標題: MuSiC: a tool for multiple sequence alignment with constraints
作者: Tsai, YT
Huang, YP
Yu, CT
Lu, CL
生物科技學系
Department of Biological Science and Technology
公開日期: 22-Sep-2004
摘要: MuSiC is a web server to perform the constrained alignment of a set of sequences, such that the user-specified residues/nucleotides are aligned with each other. The input of the MuSiC system consists of a set of protein/DNA/RNA sequences and a set of user-specified constraints, each with a fragment of residue/nucleotide that (approximately) appears in all input sequences. The output of MuSiC is a constrained multiple sequence alignment in which the fragments of the input sequences whose residues/nucleotides exhibit a given degree of similarity to a constraint are aligned together. The current MuSiC system is implemented in Java language and can be accessed via a simple web interface.
URI: http://dx.doi.org/10.1093/bioinformatics/bth220
http://hdl.handle.net/11536/26369
ISSN: 1367-4803
DOI: 10.1093/bioinformatics/bth220
期刊: BIOINFORMATICS
Volume: 20
Issue: 14
起始頁: 2309
結束頁: 2311
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